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README.md
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State Embedding model checkpoints are meant to be used with the [Arc State](https://pypi.org/project/arc-state/) repository.
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## Running from pypi
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State is distributed via [`uv`](https://docs.astral.sh/uv).
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```bash
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uv tool install arc-state
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```
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```code
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state emb --model-folder <SE-600M_MODEL_PATH> --input <INPUT_ANNDATA>.h5ad --output <OUTPUT_PATH>.h5ad
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```
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State Embedding model checkpoints are meant to be used with the [Arc State](https://pypi.org/project/arc-state/) repository.
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State is distributed via [`uv`](https://docs.astral.sh/uv).
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## Running from pypi
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```bash
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uv tool install arc-state
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```
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```code
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state emb --model-folder <SE-600M_MODEL_PATH> --input <INPUT_ANNDATA>.h5ad --output <OUTPUT_PATH>.h5ad
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```
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For model licenses please see `MODEL_ACCEPTABLE_USE_POLICY.md`, `MODEL_LICENSE.md`, and `LICENSE.md`.
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