Push model using huggingface_hub.
Browse files- README.md +3 -9
- config.json +2 -1
README.md
CHANGED
@@ -3,13 +3,7 @@ tags:
|
|
3 |
- model_hub_mixin
|
4 |
- pytorch_model_hub_mixin
|
5 |
---
|
6 |
-
---
|
7 |
-
|
8 |
-
# segment-enformer
|
9 |
-
|
10 |
-
SegmentEnformer is a segmentation model leveraging [Enformer](https://www.nature.com/articles/s41592-021-01252-x) to predict the location of several types of genomics
|
11 |
-
elements in a sequence at a single nucleotide resolution. It was trained on 14 different classes, including gene (protein-coding genes, lncRNAs, 5’UTR, 3’UTR, exon, intron, splice acceptor and donor sites) and regulatory (polyA signal, tissue-invariant and
|
12 |
-
tissue-specific promoters and enhancers, and CTCF-bound sites) elements.
|
13 |
-
|
14 |
|
15 |
-
|
|
|
|
|
|
3 |
- model_hub_mixin
|
4 |
- pytorch_model_hub_mixin
|
5 |
---
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
6 |
|
7 |
+
This model has been pushed to the Hub using the [PytorchModelHubMixin](https://huggingface.co/docs/huggingface_hub/package_reference/mixins#huggingface_hub.PyTorchModelHubMixin) integration:
|
8 |
+
- Library: [More Information Needed]
|
9 |
+
- Docs: [More Information Needed]
|
config.json
CHANGED
@@ -16,5 +16,6 @@
|
|
16 |
"enhancer_Tissue_invariant",
|
17 |
"promoter_Tissue_specific",
|
18 |
"promoter_Tissue_invariant"
|
19 |
-
]
|
|
|
20 |
}
|
|
|
16 |
"enhancer_Tissue_invariant",
|
17 |
"promoter_Tissue_specific",
|
18 |
"promoter_Tissue_invariant"
|
19 |
+
],
|
20 |
+
"model_type": "esm"
|
21 |
}
|