# Benchmarking configs BENCHMARK_FUSONPLM = True # True if you want to benchmark a FusOn-pLM Model # FUSONPLM_CKPTS. If you've traiend your own model, this is a dictionary: key = run name, values = epochs # If you want to use the trained FusOn-pLM, instead FUSONPLM_CKPTS="FusOn-pLM" FUSONPLM_CKPTS= "FusOn-pLM" # Model comparison configs BENCHMARK_ESM = True # True if you want to benchmark ESM-2-650M BENCHMARK_PROTT5 = True # True if you want to benchmark ProtT5 BENCHMARK_FO_PUNCTA_ML = True # True if you want to benchmark FO-Puncta-ML from the FOdb paper # Overwriting configs PERMISSION_TO_OVERWRITE = False # if False, script will halt if it believes these embeddings have already been made. # GPU configs CUDA_VISIBLE_DEVICES="0" # GPUs to make visible for this process